Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MBD4O95243 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD4O95243 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD4O95243 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
MBD4O95243 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD4O95243 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD4O95243 AL442647.2-201ENST00000429864 857 ntBASIC18.72■□□□□ 0.59
MBD4O95243 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD4O95243 RN7SL837P-201ENST00000463010 287 ntBASIC18.72■□□□□ 0.59
MBD4O95243 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MBD4O95243 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.72■□□□□ 0.59
MBD4O95243 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MBD4O95243 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.72■□□□□ 0.59
MBD4O95243 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MBD4O95243 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD4O95243 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD4O95243 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD4O95243 AC092850.2-201ENST00000623821 2697 ntBASIC18.72■□□□□ 0.59
MBD4O95243 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD4O95243 AC063926.2-201ENST00000623766 1308 ntBASIC18.72■□□□□ 0.59
MBD4O95243 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MBD4O95243 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.71■□□□□ 0.59
MBD4O95243 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MBD4O95243 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 INTS4P2-202ENST00000614726 2019 ntBASIC18.71■□□□□ 0.59
MBD4O95243 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MBD4O95243 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MBD4O95243 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 AL512384.1-201ENST00000406683 331 ntBASIC18.71■□□□□ 0.59
MBD4O95243 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 KRT17P7-201ENST00000451704 1104 ntBASIC18.71■□□□□ 0.59
MBD4O95243 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD4O95243 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD4O95243 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD4O95243 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.71■□□□□ 0.59
MBD4O95243 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD4O95243 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MBD4O95243 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD4O95243 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.71■□□□□ 0.58
MBD4O95243 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.71■□□□□ 0.58
MBD4O95243 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD4O95243 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD4O95243 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MBD4O95243 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD4O95243 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.7■□□□□ 0.58
MBD4O95243 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD4O95243 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD4O95243 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD4O95243 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD4O95243 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms