Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.57■□□□□ 0.4
CLSTN1O94985 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 HLA-H-201ENST00000383620 1096 ntBASIC17.57■□□□□ 0.4
CLSTN1O94985 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CLSTN1O94985 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.57■□□□□ 0.4
CLSTN1O94985 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.57■□□□□ 0.4
CLSTN1O94985 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.57■□□□□ 0.4
CLSTN1O94985 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 AL603832.2-201ENST00000566195 2125 ntBASIC17.57■□□□□ 0.4
CLSTN1O94985 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 AL596087.1-201ENST00000400979 1969 ntBASIC17.57■□□□□ 0.4
CLSTN1O94985 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 AL589702.1-201ENST00000641229 1509 ntBASIC17.57■□□□□ 0.4
CLSTN1O94985 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.56■□□□□ 0.4
CLSTN1O94985 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 PEG13-201ENST00000631594 5667 ntBASIC17.56■□□□□ 0.4
CLSTN1O94985 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLSTN1O94985 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CLSTN1O94985 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLSTN1O94985 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.56■□□□□ 0.4
CLSTN1O94985 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLSTN1O94985 TSEN15P1-201ENST00000423257 515 ntBASIC17.56■□□□□ 0.4
CLSTN1O94985 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.56■□□□□ 0.4
CLSTN1O94985 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.56■□□□□ 0.4
CLSTN1O94985 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.56■□□□□ 0.4
CLSTN1O94985 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLSTN1O94985 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.56■□□□□ 0.4
CLSTN1O94985 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.56■□□□□ 0.4
CLSTN1O94985 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CLSTN1O94985 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.56■□□□□ 0.4
CLSTN1O94985 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 AP001160.2-201ENST00000596071 487 ntBASIC17.56■□□□□ 0.4
CLSTN1O94985 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.56■□□□□ 0.4
CLSTN1O94985 AC003101.2-201ENST00000612557 442 ntBASIC17.56■□□□□ 0.4
CLSTN1O94985 FAM45BP-202ENST00000592932 1624 ntBASIC17.56■□□□□ 0.4
CLSTN1O94985 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.56■□□□□ 0.4
CLSTN1O94985 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.56■□□□□ 0.4
CLSTN1O94985 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.56■□□□□ 0.4
CLSTN1O94985 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.56■□□□□ 0.4
CLSTN1O94985 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLSTN1O94985 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLSTN1O94985 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CLSTN1O94985 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.55■□□□□ 0.4
CLSTN1O94985 METTL21AP1-201ENST00000438852 635 ntBASIC17.55■□□□□ 0.4
CLSTN1O94985 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLSTN1O94985 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.55■□□□□ 0.4
CLSTN1O94985 AC098859.1-201ENST00000502915 1238 ntBASIC17.55■□□□□ 0.4
CLSTN1O94985 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.55■□□□□ 0.4
CLSTN1O94985 AC027612.4-201ENST00000605371 583 ntBASIC17.55■□□□□ 0.4
CLSTN1O94985 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms