Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AC087499.5-201ENST00000452760 1342 ntBASIC14.06□□□□□ -0.16
TRAF3IP2O43734 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 TMBIM7P-203ENST00000641617 1718 ntBASIC14.06□□□□□ -0.16
TRAF3IP2O43734 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 PPT1-215ENST00000641471 2368 ntBASIC14.05□□□□□ -0.16
TRAF3IP2O43734 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC106028.4-201ENST00000614509 607 ntBASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC093512.1-201ENST00000617969 520 ntBASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 AC087481.3-201ENST00000602886 1894 ntBASIC14.05□□□□□ -0.16
TRAF3IP2O43734 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF3IP2O43734 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AC022532.1-201ENST00000624563 1728 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms