Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SURF4O15260 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SURF4O15260 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 LINC00528-201ENST00000600723 2160 ntBASIC14.29□□□□□ -0.12
SURF4O15260 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.29□□□□□ -0.12
SURF4O15260 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.29□□□□□ -0.12
SURF4O15260 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 AP002472.1-201ENST00000577490 586 ntBASIC14.29□□□□□ -0.12
SURF4O15260 MTDHP5-201ENST00000598980 586 ntBASIC14.29□□□□□ -0.12
SURF4O15260 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 AL450472.2-201ENST00000603663 1156 ntBASIC14.29□□□□□ -0.12
SURF4O15260 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SURF4O15260 AL136982.4-201ENST00000437689 1740 ntBASIC14.29□□□□□ -0.12
SURF4O15260 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SURF4O15260 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.29□□□□□ -0.12
SURF4O15260 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SURF4O15260 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SURF4O15260 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.28□□□□□ -0.12
SURF4O15260 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SURF4O15260 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.28□□□□□ -0.12
SURF4O15260 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.28□□□□□ -0.12
SURF4O15260 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 PDPK2P-202ENST00000562415 1191 ntBASIC14.28□□□□□ -0.12
SURF4O15260 RARRES2P8-201ENST00000566335 367 ntBASIC14.28□□□□□ -0.12
SURF4O15260 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.28□□□□□ -0.12
SURF4O15260 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.28□□□□□ -0.12
SURF4O15260 AC099522.2-201ENST00000607001 744 ntBASIC14.28□□□□□ -0.12
SURF4O15260 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SURF4O15260 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.28□□□□□ -0.12
SURF4O15260 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
SURF4O15260 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.28□□□□□ -0.12
SURF4O15260 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.28□□□□□ -0.12
SURF4O15260 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SURF4O15260 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SURF4O15260 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SURF4O15260 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.27□□□□□ -0.12
SURF4O15260 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SURF4O15260 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SURF4O15260 AL390755.1-201ENST00000623716 2027 ntBASIC14.27□□□□□ -0.12
SURF4O15260 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms