Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 AL513523.2-202ENST00000427283 2040 ntBASIC18.84■□□□□ 0.61
SEMA3EO15041 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 AL391005.1-201ENST00000623953 2435 ntBASIC18.84■□□□□ 0.61
SEMA3EO15041 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA3EO15041 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.83■□□□□ 0.61
SEMA3EO15041 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.83■□□□□ 0.61
SEMA3EO15041 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA3EO15041 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA3EO15041 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.83■□□□□ 0.6
SEMA3EO15041 RPL7P3-201ENST00000441388 714 ntBASIC18.83■□□□□ 0.6
SEMA3EO15041 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SEMA3EO15041 CTBP2P5-201ENST00000454986 1264 ntBASIC18.83■□□□□ 0.6
SEMA3EO15041 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA3EO15041 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA3EO15041 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA3EO15041 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA3EO15041 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA3EO15041 AL645728.2-202ENST00000641679 227 ntBASIC18.83■□□□□ 0.6
SEMA3EO15041 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SEMA3EO15041 AC079328.2-201ENST00000561241 3354 ntBASIC18.83■□□□□ 0.6
SEMA3EO15041 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA3EO15041 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3EO15041 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SEMA3EO15041 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA3EO15041 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.82■□□□□ 0.6
SEMA3EO15041 AC007551.1-201ENST00000457394 519 ntBASIC18.82■□□□□ 0.6
SEMA3EO15041 AC106760.1-201ENST00000508690 800 ntBASIC18.82■□□□□ 0.6
SEMA3EO15041 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 BX539320.1-201ENST00000623759 877 ntBASIC18.82■□□□□ 0.6
SEMA3EO15041 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA3EO15041 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA3EO15041 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SEMA3EO15041 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA3EO15041 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3EO15041 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3EO15041 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA3EO15041 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SEMA3EO15041 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.81■□□□□ 0.6
SEMA3EO15041 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms