Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.83■□□□□ 0.28
O00370 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 AC074338.1-201ENST00000416825 156 ntBASIC16.83■□□□□ 0.28
O00370 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.83■□□□□ 0.28
O00370 TARDBPP1-201ENST00000442013 1203 ntBASIC16.83■□□□□ 0.28
O00370 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.83■□□□□ 0.28
O00370 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.83■□□□□ 0.28
O00370 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.83■□□□□ 0.28
O00370 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.83■□□□□ 0.28
O00370 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
O00370 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.83■□□□□ 0.28
O00370 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.83■□□□□ 0.28
O00370 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.83■□□□□ 0.28
O00370 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.83■□□□□ 0.28
O00370 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
O00370 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
O00370 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
O00370 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.83■□□□□ 0.28
O00370 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.83■□□□□ 0.28
O00370 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.83■□□□□ 0.28
O00370 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
O00370 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.83■□□□□ 0.28
O00370 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
O00370 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.82■□□□□ 0.28
O00370 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
O00370 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.82■□□□□ 0.28
O00370 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.82■□□□□ 0.28
O00370 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.82■□□□□ 0.28
O00370 AC092127.1-201ENST00000567093 3455 ntBASIC16.82■□□□□ 0.28
O00370 AP002414.2-201ENST00000591780 3365 ntBASIC16.82■□□□□ 0.28
O00370 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 Z97205.2-201ENST00000564697 1639 ntBASIC16.82■□□□□ 0.28
O00370 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
O00370 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.82■□□□□ 0.28
O00370 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.82■□□□□ 0.28
O00370 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.82■□□□□ 0.28
O00370 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.82■□□□□ 0.28
O00370 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.82■□□□□ 0.28
O00370 AC093214.1-201ENST00000511688 1107 ntBASIC16.82■□□□□ 0.28
O00370 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.82■□□□□ 0.28
O00370 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.82■□□□□ 0.28
O00370 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.82■□□□□ 0.28
O00370 AC009407.1-201ENST00000568958 598 ntBASIC16.82■□□□□ 0.28
O00370 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
O00370 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.82■□□□□ 0.28
O00370 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
O00370 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
O00370 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.82■□□□□ 0.28
O00370 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 SSR4P1-203ENST00000599569 2260 ntBASIC16.81■□□□□ 0.28
O00370 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.81■□□□□ 0.28
O00370 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.81■□□□□ 0.28
O00370 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
O00370 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms