Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 PRSS29P-201ENST00000440800 595 ntBASIC13.53□□□□□ -0.24
TMEM235A6NFC5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 MIR4313-201ENST00000580760 101 ntBASIC13.53□□□□□ -0.24
TMEM235A6NFC5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 ST20-AS1-201ENST00000560255 4223 ntBASIC13.53□□□□□ -0.24
TMEM235A6NFC5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TMEM235A6NFC5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM235A6NFC5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 KRT18P35-201ENST00000510488 1269 ntBASIC13.52□□□□□ -0.25
TMEM235A6NFC5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 AC117500.6-201ENST00000624871 588 ntBASIC13.52□□□□□ -0.25
TMEM235A6NFC5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.52□□□□□ -0.25
TMEM235A6NFC5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM235A6NFC5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms