Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC024267.1-201ENST00000582320 895 ntBASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL589739.1-201ENST00000607720 493 ntBASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CETN4P-206ENST00000642099 2168 ntBASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FOXO1B-201ENST00000504678 1527 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC100757.3-201ENST00000622361 1406 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MIR600HG-201ENST00000449175 5984 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FAM207CP-201ENST00000443486 507 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 UGT1A2P-201ENST00000454886 866 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RN7SL204P-201ENST00000582831 262 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LINC02560-201ENST00000596379 459 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL138828.2-201ENST00000615812 383 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SPDYE12P-201ENST00000618416 771 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL590560.3-201ENST00000623350 461 ntBASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC023824.1-201ENST00000562945 2975 ntBASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC020658.6-201ENST00000623564 1870 ntBASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms