Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AKAP8P1-201ENST00000434743 1349 ntBASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC007967.2-201ENST00000432613 625 ntBASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 MIR4313-201ENST00000580760 101 ntBASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV6-7A0A0A0MS04 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC005252.3-201ENST00000623855 2258 ntBASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 KRT126P-201ENST00000549467 1181 ntBASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC006504.5-208ENST00000588784 2401 ntBASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
TRBV6-7A0A0A0MS04 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms