Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 AC011474.4-201ENST00000623523 2076 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 NUS1P1-201ENST00000446295 882 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 MPDU1-223ENST00000582151 728 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 TERC-201ENST00000602385 541 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 AC097359.2-201ENST00000604992 2389 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 AL353732.1-201ENST00000569618 1459 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 AC004899.2-201ENST00000622993 3860 ntBASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAPPC1Q9Y5R8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 MST1P2-201ENST00000457982 2291 ntBASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 PPP1R14BP3-201ENST00000509033 445 ntBASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
TRAPPC1Q9Y5R8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms