Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC114501.2-201ENST00000439631 535 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 GPR53P-205ENST00000457298 1084 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC135586.1-201ENST00000539323 574 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 HILS1-202ENST00000545329 423 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 LINC01115-203ENST00000606068 577 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC004233.3-201ENST00000607794 1269 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC009118.2-201ENST00000613275 655 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC004461.2-201ENST00000629517 803 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC004840.1-201ENST00000636359 365 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 AC132872.4-202ENST00000622924 2756 ntBASIC15.96■□□□□ 0.15
RAI2Q9Y5P3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAI2Q9Y5P3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAI2Q9Y5P3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAI2Q9Y5P3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.96■□□□□ 0.14
RAI2Q9Y5P3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAI2Q9Y5P3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAI2Q9Y5P3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RAI2Q9Y5P3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CU639417.3-201ENST00000624240 1404 ntBASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.95■□□□□ 0.14
RAI2Q9Y5P3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 AC092127.1-201ENST00000567093 3455 ntBASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.94■□□□□ 0.14
RAI2Q9Y5P3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms