Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LEMD3Q9Y2U8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 LINC02447-202ENST00000501888 2146 ntBASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 RNA5SP486-201ENST00000515961 83 ntBASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 AC138951.2-201ENST00000623455 1161 ntBASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.96■□□□□ 0.63
LEMD3Q9Y2U8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 KLF2P2-201ENST00000416807 1039 ntBASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 CD8B2-202ENST00000417670 633 ntBASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 PRSS30P-206ENST00000641773 873 ntBASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 AHCYP2-201ENST00000430630 1300 ntBASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LEMD3Q9Y2U8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.94■□□□□ 0.62
LEMD3Q9Y2U8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 299.5 ms