Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AC243562.2-201ENST00000561247 970 ntBASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 AL590560.3-201ENST00000623350 461 ntBASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NORAD-201ENST00000565493 5339 ntBASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPH3AQ9Y2J0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 AL603832.2-201ENST00000566195 2125 ntBASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 AL080243.2-201ENST00000418783 582 ntBASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 AC022494.1-201ENST00000466044 728 ntBASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RPH3AQ9Y2J0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 AC022188.1-201ENST00000620960 1664 ntBASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms