Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
FOXA2Q9Y261 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 BNIP3P1-202ENST00000550043 1585 ntBASIC12.81□□□□□ -0.36
FOXA2Q9Y261 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AC004987.2-201ENST00000395959 1148 ntBASIC12.81□□□□□ -0.36
FOXA2Q9Y261 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AP001160.2-201ENST00000596071 487 ntBASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AC009093.7-201ENST00000623853 1223 ntBASIC12.81□□□□□ -0.36
FOXA2Q9Y261 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 REXO1L1P-202ENST00000608646 1974 ntBASIC12.81□□□□□ -0.36
FOXA2Q9Y261 AC112693.3-201ENST00000624819 1983 ntBASIC12.81□□□□□ -0.36
FOXA2Q9Y261 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXA2Q9Y261 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.8□□□□□ -0.36
FOXA2Q9Y261 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms