Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 AC106028.4-201ENST00000614509 607 ntBASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 AC022532.1-201ENST00000624563 1728 ntBASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4E1Q9UPM8 Z97205.2-201ENST00000564697 1639 ntBASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AC093512.1-201ENST00000617969 520 ntBASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AC087499.5-201ENST00000452760 1342 ntBASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 AC013268.4-201ENST00000637413 2228 ntBASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4E1Q9UPM8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
AP4E1Q9UPM8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms