Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB4Q9UN71 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PCDHGB4Q9UN71 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 AC007686.3-201ENST00000619017 3487 ntBASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 MRPL3P1-201ENST00000400109 1033 ntBASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 AC140658.5-201ENST00000438532 169 ntBASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB4Q9UN71 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 AL161645.1-201ENST00000622716 1255 ntBASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 BCAR1-209ENST00000546196 1340 ntBASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB4Q9UN71 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 323.9 ms