Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AC008738.7-201ENST00000609744 511 ntBASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 KRT8P44-201ENST00000441609 1350 ntBASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AC138969.3-201ENST00000546612 1459 ntBASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AC138932.2-201ENST00000548268 1459 ntBASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AC126755.4-201ENST00000549796 1459 ntBASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 MRPS18AP1-201ENST00000414458 589 ntBASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 BASP1P1-201ENST00000430708 665 ntBASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 AC004840.1-201ENST00000636359 365 ntBASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 AL596257.1-201ENST00000641463 2694 ntBASIC16.6■□□□□ 0.25
PCDHGC3Q9UN70 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 AC006486.2-201ENST00000624246 2199 ntBASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 AC126365.1-201ENST00000578585 1514 ntBASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms