Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AC073439.1-201ENST00000624121 1774 ntBASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AC112693.3-201ENST00000624819 1983 ntBASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AL035696.2-201ENST00000407941 709 ntBASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AL512356.2-201ENST00000546955 174 ntBASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AP001059.3-201ENST00000619053 235 ntBASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 UXT-AS1-201ENST00000590504 1525 ntBASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 AP001282.1-201ENST00000531301 1499 ntBASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 CNN2P2-201ENST00000443536 909 ntBASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 CNN2P3-201ENST00000450201 906 ntBASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 AC067863.1-201ENST00000494933 530 ntBASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 AC069262.1-201ENST00000539058 672 ntBASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 AL136317.3-201ENST00000618497 906 ntBASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.27■□□□□ 0.2
RABGEF1Q9UJ41 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RABGEF1Q9UJ41 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RABGEF1Q9UJ41 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms