Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AC139795.1-202ENST00000500444 432 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AC243732.1-201ENST00000612648 864 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 FAM90A12P-201ENST00000519497 2375 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 FAM90A24P-201ENST00000520792 2369 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AP001267.2-201ENST00000532619 2086 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 KRT8P7-201ENST00000533003 1432 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AC024075.2-201ENST00000598112 1473 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PPP1R26P1-201ENST00000474415 3613 ntBASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC7.93□□□□□ -1.14
CDC42SE1Q9NRR8 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms