Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MRM3Q9HC36 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 AL033527.5-202ENST00000641632 1098 ntBASIC15.78■□□□□ 0.12
MRM3Q9HC36 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MRM3Q9HC36 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRM3Q9HC36 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.78■□□□□ 0.12
MRM3Q9HC36 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC074338.1-201ENST00000416825 156 ntBASIC15.77■□□□□ 0.12
MRM3Q9HC36 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 SLED1-202ENST00000512051 380 ntBASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC025048.3-201ENST00000590609 569 ntBASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC005702.4-201ENST00000618393 416 ntBASIC15.77■□□□□ 0.12
MRM3Q9HC36 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.77■□□□□ 0.12
MRM3Q9HC36 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MRM3Q9HC36 AC084364.1-201ENST00000551967 1556 ntBASIC15.77■□□□□ 0.11
MRM3Q9HC36 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MRM3Q9HC36 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MRM3Q9HC36 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MRM3Q9HC36 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MRM3Q9HC36 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MRM3Q9HC36 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 AC148477.4-201ENST00000613430 1793 ntBASIC15.77■□□□□ 0.11
MRM3Q9HC36 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MRM3Q9HC36 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.77■□□□□ 0.11
MRM3Q9HC36 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MRM3Q9HC36 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 FO538757.1-201ENST00000623083 1397 ntBASIC15.76■□□□□ 0.11
MRM3Q9HC36 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 RPL37AP1-201ENST00000412502 279 ntBASIC15.76■□□□□ 0.11
MRM3Q9HC36 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRM3Q9HC36 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.76■□□□□ 0.11
MRM3Q9HC36 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.76■□□□□ 0.11
MRM3Q9HC36 AC109322.1-201ENST00000524499 1264 ntBASIC15.76■□□□□ 0.11
MRM3Q9HC36 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms