Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 PCDHA3-202ENST00000532566 4594 ntBASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HDHD3Q9BSH5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC105233.2-201ENST00000523697 349 ntBASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AF228730.5-201ENST00000530288 346 ntBASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AL662844.1-201ENST00000546340 181 ntBASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 RARRES2P8-201ENST00000566335 367 ntBASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC024267.1-201ENST00000582320 895 ntBASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 AC092865.6-201ENST00000642101 219 ntBASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 FAM45BP-202ENST00000592932 1624 ntBASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HDHD3Q9BSH5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms