Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AP005117.1-201ENST00000584346 1413 ntBASIC10.51□□□□□ -0.73
LITAFQ99732 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 AL161772.1-201ENST00000610494 4412 ntBASIC10.51□□□□□ -0.73
LITAFQ99732 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 MED16-201ENST00000269814 1199 ntTSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 POM121L3P-201ENST00000419331 1163 ntBASIC10.51□□□□□ -0.73
LITAFQ99732 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.51□□□□□ -0.73
LITAFQ99732 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
LITAFQ99732 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC10.51□□□□□ -0.73
LITAFQ99732 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 MIR3909-201ENST00000579518 119 ntBASIC10.51□□□□□ -0.73
LITAFQ99732 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
LITAFQ99732 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 AC097493.4-201ENST00000641197 219 ntBASIC10.51□□□□□ -0.73
LITAFQ99732 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LITAFQ99732 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LITAFQ99732 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 AL589702.1-201ENST00000641229 1509 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 TERF1P1-201ENST00000311003 1181 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LITAFQ99732 PPIH-202ENST00000372549 327 ntTSL 3 BASIC10.5□□□□□ -0.73
LITAFQ99732 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LITAFQ99732 AC092647.4-201ENST00000457211 535 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC10.5□□□□□ -0.73
LITAFQ99732 AC139887.3-201ENST00000568585 713 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LITAFQ99732 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LITAFQ99732 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 GGTLC5P-201ENST00000617623 998 ntBASIC10.5□□□□□ -0.73
LITAFQ99732 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms