Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDCA3Q99618 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CDCA3Q99618 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDCA3Q99618 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.19■□□□□ 0.18
CDCA3Q99618 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.19■□□□□ 0.18
CDCA3Q99618 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDCA3Q99618 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.19■□□□□ 0.18
CDCA3Q99618 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.19■□□□□ 0.18
CDCA3Q99618 MIR4706-201ENST00000582134 82 ntBASIC16.19■□□□□ 0.18
CDCA3Q99618 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
CDCA3Q99618 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.19■□□□□ 0.18
CDCA3Q99618 AL023803.2-201ENST00000620080 638 ntBASIC16.19■□□□□ 0.18
CDCA3Q99618 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.19■□□□□ 0.18
CDCA3Q99618 AC100757.4-201ENST00000626934 759 ntBASIC16.19■□□□□ 0.18
CDCA3Q99618 AC128714.1-201ENST00000637035 887 ntBASIC16.19■□□□□ 0.18
CDCA3Q99618 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.19■□□□□ 0.18
CDCA3Q99618 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDCA3Q99618 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDCA3Q99618 ALOX12P2-203ENST00000570921 1945 ntBASIC16.19■□□□□ 0.18
CDCA3Q99618 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDCA3Q99618 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CDCA3Q99618 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDCA3Q99618 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.19■□□□□ 0.18
CDCA3Q99618 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDCA3Q99618 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.18■□□□□ 0.18
CDCA3Q99618 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.18■□□□□ 0.18
CDCA3Q99618 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.18■□□□□ 0.18
CDCA3Q99618 Z97180.1-201ENST00000445173 988 ntBASIC16.18■□□□□ 0.18
CDCA3Q99618 SPTLC1P5-201ENST00000450718 252 ntBASIC16.18■□□□□ 0.18
CDCA3Q99618 RPS2P36-201ENST00000456516 831 ntBASIC16.18■□□□□ 0.18
CDCA3Q99618 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.18■□□□□ 0.18
CDCA3Q99618 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.18■□□□□ 0.18
CDCA3Q99618 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDCA3Q99618 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 TUBBP5-203ENST00000508529 1334 ntBASIC16.18■□□□□ 0.18
CDCA3Q99618 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDCA3Q99618 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.18■□□□□ 0.18
CDCA3Q99618 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.17■□□□□ 0.18
CDCA3Q99618 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.17■□□□□ 0.18
CDCA3Q99618 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.17■□□□□ 0.18
CDCA3Q99618 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDCA3Q99618 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.17■□□□□ 0.18
CDCA3Q99618 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CDCA3Q99618 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.17■□□□□ 0.18
CDCA3Q99618 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.17■□□□□ 0.18
CDCA3Q99618 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.17■□□□□ 0.18
CDCA3Q99618 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.17■□□□□ 0.18
CDCA3Q99618 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.17■□□□□ 0.18
CDCA3Q99618 AC253536.4-201ENST00000440539 267 ntBASIC16.17■□□□□ 0.18
CDCA3Q99618 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDCA3Q99618 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.17■□□□□ 0.18
CDCA3Q99618 AC005740.2-201ENST00000511085 419 ntBASIC16.17■□□□□ 0.18
CDCA3Q99618 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.17■□□□□ 0.18
CDCA3Q99618 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.17■□□□□ 0.18
CDCA3Q99618 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.17■□□□□ 0.18
CDCA3Q99618 AC091544.8-201ENST00000619490 361 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms