Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 CTBP2P3-201ENST00000585629 1255 ntBASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC133539.2-201ENST00000604757 467 ntBASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDK5RAP1Q96SZ6 AC103702.1-201ENST00000548801 2630 ntBASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AC098850.1-201ENST00000419919 790 ntBASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDK5RAP1Q96SZ6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms