Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 MIR4313-201ENST00000580760 101 ntBASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 AC139749.1-202ENST00000617529 3139 ntBASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 AP002414.3-201ENST00000589352 1468 ntBASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 AL645939.2-201ENST00000427340 991 ntBASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 PRSS29P-201ENST00000440800 595 ntBASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 ST20-AS1-201ENST00000560255 4223 ntBASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NSMCE2Q96MF7 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.96□□□□□ -0.02
NSMCE2Q96MF7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NSMCE2Q96MF7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NSMCE2Q96MF7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NSMCE2Q96MF7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NSMCE2Q96MF7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NSMCE2Q96MF7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 MIR4751-201ENST00000578027 74 ntBASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NSMCE2Q96MF7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms