Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.33■□□□□ 0.2
C9orf72Q96LT7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf72Q96LT7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SNX18-202ENST00000343017 3140 ntBASIC16.32■□□□□ 0.2
C9orf72Q96LT7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C9orf72Q96LT7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 FAM45BP-202ENST00000592932 1624 ntBASIC16.31■□□□□ 0.2
C9orf72Q96LT7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 AC002056.1-201ENST00000395613 760 ntBASIC16.31■□□□□ 0.2
C9orf72Q96LT7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 METTL21AP1-201ENST00000438852 635 ntBASIC16.31■□□□□ 0.2
C9orf72Q96LT7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 AP000344.2-201ENST00000512987 629 ntBASIC16.31■□□□□ 0.2
C9orf72Q96LT7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf72Q96LT7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf72Q96LT7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf72Q96LT7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf72Q96LT7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf72Q96LT7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf72Q96LT7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms