Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 UGT1A2P-201ENST00000454886 866 ntBASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 MIR3197-201ENST00000582241 73 ntBASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 AC087499.5-201ENST00000452760 1342 ntBASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMARCC2Q8TAQ2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 TSPY16P-201ENST00000449843 468 ntBASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCC2Q8TAQ2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCC2Q8TAQ2 KRT8P44-201ENST00000441609 1350 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms