Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 NME2P1-201ENST00000426182 414 ntBASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AC012645.4-201ENST00000610691 1061 ntBASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 WFDC1-204ENST00000613603 549 ntBASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 RPSAP52-203ENST00000622976 1023 ntBASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AC098614.1-201ENST00000368528 745 ntBASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AC124283.3-201ENST00000570869 594 ntBASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ARHGEF39Q8N4T4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ARHGEF39Q8N4T4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARHGEF39Q8N4T4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARHGEF39Q8N4T4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARHGEF39Q8N4T4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARHGEF39Q8N4T4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ARHGEF39Q8N4T4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.79□□□□□ -0.04
ARHGEF39Q8N4T4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms