Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 NUTM2HP-201ENST00000442076 2498 ntBASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AC148477.5-201ENST00000625164 1645 ntBASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AL845331.1-201ENST00000424978 1190 ntBASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 FAM8A3P-201ENST00000427218 844 ntBASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AC091167.2-201ENST00000579581 588 ntBASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 IGHV3-41-201ENST00000613121 348 ntBASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.38□□□□□ -0.11
CROCCP3Q8IVE0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 SPDYE21P-201ENST00000413323 827 ntBASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 SLC25A3P1-201ENST00000443844 931 ntBASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 TSPY20P-201ENST00000450910 630 ntBASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 SIGLEC16-201ENST00000599858 1437 ntBASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 AL590787.1-201ENST00000568856 1315 ntBASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CROCCP3Q8IVE0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms