Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 AC011477.6-201ENST00000604980 1927 ntBASIC17.56■□□□□ 0.4
TRIM50Q86XT4 MTHFR-217ENST00000641820 1569 ntBASIC17.56■□□□□ 0.4
TRIM50Q86XT4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC134915.1-201ENST00000426461 574 ntBASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC120045.2-201ENST00000567334 178 ntBASIC17.55■□□□□ 0.4
TRIM50Q86XT4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 BTNL10-201ENST00000595971 695 ntBASIC17.55■□□□□ 0.4
TRIM50Q86XT4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 MIR6775-201ENST00000617557 69 ntBASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC124067.4-201ENST00000519691 2379 ntBASIC17.55■□□□□ 0.4
TRIM50Q86XT4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 AC046158.3-201ENST00000624947 2558 ntBASIC17.55■□□□□ 0.4
TRIM50Q86XT4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM50Q86XT4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 RPS2P32-201ENST00000439199 892 ntBASIC17.54■□□□□ 0.4
TRIM50Q86XT4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 TDH-203ENST00000531764 1110 ntBASIC17.54■□□□□ 0.4
TRIM50Q86XT4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 AC233724.13-201ENST00000598383 410 ntBASIC17.54■□□□□ 0.4
TRIM50Q86XT4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.54■□□□□ 0.4
TRIM50Q86XT4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms