Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 CRYGEP-201ENST00000412192 528 ntBASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 UNC93B7-201ENST00000509439 705 ntBASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 AC005912.2-201ENST00000619492 2400 ntBASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 ZBED1P1-201ENST00000502364 1930 ntBASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRTM1Q86UE6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 AC009947.1-201ENST00000444350 727 ntBASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 AC012313.10-201ENST00000623509 926 ntBASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRTM1Q86UE6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms