Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 AC134312.5-201ENST00000568031 1313 ntBASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 AL133267.1-201ENST00000398220 340 ntBASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 AC012441.1-201ENST00000446669 685 ntBASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 AC093813.1-201ENST00000605066 256 ntBASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC149Q6ZUS6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 AC022211.2-201ENST00000585075 2527 ntBASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC149Q6ZUS6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC149Q6ZUS6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 ACKR1-201ENST00000368121 1240 ntBASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC149Q6ZUS6 MIR1247-201ENST00000408206 136 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms