Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AC005089.1-201ENST00000619486 2241 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AC098831.1-202ENST00000438821 336 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AL109954.1-202ENST00000564051 2148 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AL049840.3-201ENST00000602669 611 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AL589182.2-201ENST00000619332 1049 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 AC005593.1-201ENST00000624894 515 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 CICP24-201ENST00000605464 2705 ntBASIC13.89□□□□□ -0.19
C11orf88Q6PI97 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 MED15P5-201ENST00000423150 992 ntBASIC13.88□□□□□ -0.19
C11orf88Q6PI97 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 DNAJB3-201ENST00000446806 729 ntBASIC13.88□□□□□ -0.19
C11orf88Q6PI97 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 AC092910.1-201ENST00000482027 1129 ntBASIC13.88□□□□□ -0.19
C11orf88Q6PI97 AC092865.5-201ENST00000545435 363 ntBASIC13.88□□□□□ -0.19
C11orf88Q6PI97 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 AC139530.3-201ENST00000620344 690 ntBASIC13.88□□□□□ -0.19
C11orf88Q6PI97 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 AC104109.2-201ENST00000602919 1418 ntBASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf88Q6PI97 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C11orf88Q6PI97 TMBIM7P-203ENST00000641617 1718 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms