Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC144NLQ6NUI1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC144NLQ6NUI1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 ZNF890P-202ENST00000530367 1156 ntBASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 AC022188.1-201ENST00000620960 1664 ntBASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 BTBD7P1-201ENST00000447253 1453 ntBASIC12.85□□□□□ -0.35
CCDC144NLQ6NUI1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 MYO15B-237ENST00000642007 4893 ntBASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 AC092580.3-201ENST00000430932 139 ntBASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 AC011467.4-201ENST00000594891 528 ntBASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 AL590560.3-201ENST00000623350 461 ntBASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC144NLQ6NUI1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms