Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN20Q4JDL3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.58■□□□□ 0.25
PTPN20Q4JDL3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AC008738.7-201ENST00000609744 511 ntBASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 AC144831.1-201ENST00000573312 2656 ntBASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN20Q4JDL3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 C18orf15-201ENST00000623680 2534 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 MRPS18AP1-201ENST00000414458 589 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 AC015922.1-201ENST00000421102 1152 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 AC114501.2-201ENST00000439631 535 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 SPDYE18-201ENST00000510091 1050 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 AC093214.1-201ENST00000511688 1107 ntBASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN20Q4JDL3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms