Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC01559Q495D7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01559Q495D7 AC006504.4-201ENST00000592118 1568 ntBASIC12.05□□□□□ -0.48
LINC01559Q495D7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01559Q495D7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01559Q495D7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ATP5F1P6-201ENST00000402768 767 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ATP5G2P1-201ENST00000433580 426 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 MTND1P31-201ENST00000449206 961 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 AL360268.1-201ENST00000453870 765 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AC023158.1-201ENST00000561632 1025 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ZNF92P2-201ENST00000600543 1059 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 AC021097.1-201ENST00000607902 574 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AL355877.3-201ENST00000622820 899 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 MAPK10-350ENST00000641777 965 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.04□□□□□ -0.48
LINC01559Q495D7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LINC01559Q495D7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01559Q495D7 AC011477.6-201ENST00000604980 1927 ntBASIC12.03□□□□□ -0.48
LINC01559Q495D7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01559Q495D7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
LINC01559Q495D7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01559Q495D7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01559Q495D7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
LINC01559Q495D7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC01559Q495D7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 AC012569.1-201ENST00000591191 1524 ntBASIC12.03□□□□□ -0.48
LINC01559Q495D7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01559Q495D7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01559Q495D7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms