Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 PPY2P-201ENST00000582808 702 ntBASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 AC087045.2-201ENST00000606279 1003 ntBASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 AL805961.1-201ENST00000642026 753 ntBASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RSPO4Q2I0M5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AC060834.1-201ENST00000443027 2032 ntBASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AL157792.1-201ENST00000488281 530 ntBASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AC010234.1-201ENST00000494599 870 ntBASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AC243562.2-201ENST00000561247 970 ntBASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AC005730.2-201ENST00000564549 1184 ntBASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 AL353770.1-201ENST00000614915 403 ntBASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO4Q2I0M5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms