Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.45■□□□□ 0.7
R3HDM1Q15032 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
R3HDM1Q15032 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.45■□□□□ 0.7
R3HDM1Q15032 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
R3HDM1Q15032 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.45■□□□□ 0.7
R3HDM1Q15032 AL592424.1-201ENST00000563624 1536 ntBASIC19.45■□□□□ 0.7
R3HDM1Q15032 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM1Q15032 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.45■□□□□ 0.7
R3HDM1Q15032 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 TNXA-203ENST00000507684 2038 ntBASIC19.44■□□□□ 0.7
R3HDM1Q15032 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.44■□□□□ 0.7
R3HDM1Q15032 IGHEP1-201ENST00000521393 651 ntBASIC19.44■□□□□ 0.7
R3HDM1Q15032 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM1Q15032 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
R3HDM1Q15032 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 GGT3P-204ENST00000453783 1664 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 HTR7P1-202ENST00000624664 4411 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 CROCCP2-202ENST00000412962 2773 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 HNRNPA1P58-201ENST00000403629 610 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 EIF3FP3-201ENST00000434851 1086 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 AC004837.1-201ENST00000446267 564 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 AREG-202ENST00000502307 956 ntTSL 5 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 TMCO5B-205ENST00000530020 894 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.43■□□□□ 0.7
R3HDM1Q15032 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 AC090502.4-201ENST00000551714 1386 ntBASIC19.43■□□□□ 0.7
R3HDM1Q15032 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM1Q15032 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 AC084752.1-201ENST00000509766 622 ntBASIC19.42■□□□□ 0.7
R3HDM1Q15032 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 MIR4683-201ENST00000579659 81 ntBASIC19.42■□□□□ 0.7
R3HDM1Q15032 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 AC009955.4-201ENST00000597192 544 ntBASIC19.42■□□□□ 0.7
R3HDM1Q15032 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms