Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40BQ12829 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40BQ12829 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40BQ12829 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40BQ12829 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40BQ12829 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB40BQ12829 AC117500.6-201ENST00000624871 588 ntBASIC14.18□□□□□ -0.14
RAB40BQ12829 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB40BQ12829 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40BQ12829 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40BQ12829 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40BQ12829 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40BQ12829 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.17□□□□□ -0.14
RAB40BQ12829 AC018712.1-201ENST00000455767 687 ntBASIC14.17□□□□□ -0.14
RAB40BQ12829 AC098859.1-201ENST00000502915 1238 ntBASIC14.17□□□□□ -0.14
RAB40BQ12829 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 AC061975.2-201ENST00000581722 295 ntBASIC14.17□□□□□ -0.14
RAB40BQ12829 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40BQ12829 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 AL450472.2-201ENST00000603663 1156 ntBASIC14.17□□□□□ -0.14
RAB40BQ12829 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAB40BQ12829 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 WASH3P-207ENST00000560956 1394 ntBASIC14.17□□□□□ -0.14
RAB40BQ12829 FO538757.1-201ENST00000623083 1397 ntBASIC14.17□□□□□ -0.14
RAB40BQ12829 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40BQ12829 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB40BQ12829 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40BQ12829 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.16□□□□□ -0.14
RAB40BQ12829 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40BQ12829 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40BQ12829 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RAB40BQ12829 IGLL3P-201ENST00000412472 434 ntBASIC14.16□□□□□ -0.14
RAB40BQ12829 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40BQ12829 HNRNPDP1-201ENST00000439535 754 ntBASIC14.16□□□□□ -0.14
RAB40BQ12829 HCG4P8-203ENST00000443049 980 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms