Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC3A1Q07837 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC3A1Q07837 AC092127.1-201ENST00000567093 3455 ntBASIC14.3□□□□□ -0.12
SLC3A1Q07837 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC3A1Q07837 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC3A1Q07837 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC3A1Q07837 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC3A1Q07837 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC3A1Q07837 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC3A1Q07837 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 PDPK2P-202ENST00000562415 1191 ntBASIC14.29□□□□□ -0.12
SLC3A1Q07837 AC018845.2-201ENST00000568326 409 ntBASIC14.29□□□□□ -0.12
SLC3A1Q07837 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 AC021097.1-201ENST00000607902 574 ntBASIC14.29□□□□□ -0.12
SLC3A1Q07837 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 AC006538.3-201ENST00000612495 578 ntBASIC14.29□□□□□ -0.12
SLC3A1Q07837 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 SNX18-202ENST00000343017 3140 ntBASIC14.29□□□□□ -0.12
SLC3A1Q07837 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
SLC3A1Q07837 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC3A1Q07837 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 AC074386.1-202ENST00000463561 864 ntBASIC14.28□□□□□ -0.12
SLC3A1Q07837 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 KRT19P2-202ENST00000557173 1012 ntBASIC14.28□□□□□ -0.12
SLC3A1Q07837 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC3A1Q07837 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC3A1Q07837 AC090616.6-203ENST00000579186 1945 ntBASIC14.28□□□□□ -0.12
SLC3A1Q07837 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms