Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP1Q04837 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 AC018892.3-201ENST00000623986 2499 ntBASIC13.38□□□□□ -0.27
SSBP1Q04837 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP1Q04837 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP1Q04837 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP1Q04837 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.38□□□□□ -0.27
SSBP1Q04837 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
SSBP1Q04837 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP1Q04837 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.38□□□□□ -0.27
SSBP1Q04837 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 NPAP1P7-201ENST00000613027 823 ntBASIC13.38□□□□□ -0.27
SSBP1Q04837 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP1Q04837 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP1Q04837 ACE3P-201ENST00000423435 1973 ntBASIC13.38□□□□□ -0.27
SSBP1Q04837 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP1Q04837 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms