Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR6069-201ENST00000620069 79 ntBASIC14.95□□□□□ -0.02
RAE1P78406 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.95□□□□□ -0.02
RAE1P78406 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAE1P78406 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RAE1P78406 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RAE1P78406 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RAE1P78406 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 AC084364.1-201ENST00000551967 1556 ntBASIC14.94□□□□□ -0.02
RAE1P78406 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.94□□□□□ -0.02
RAE1P78406 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.94□□□□□ -0.02
RAE1P78406 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.94□□□□□ -0.02
RAE1P78406 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.94□□□□□ -0.02
RAE1P78406 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.94□□□□□ -0.02
RAE1P78406 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 MIR1233-2-201ENST00000408138 82 ntBASIC14.94□□□□□ -0.02
RAE1P78406 MIR1233-1-201ENST00000408722 82 ntBASIC14.94□□□□□ -0.02
RAE1P78406 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.94□□□□□ -0.02
RAE1P78406 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.94□□□□□ -0.02
RAE1P78406 AL512361.1-201ENST00000554200 418 ntBASIC14.94□□□□□ -0.02
RAE1P78406 TEX28P1-201ENST00000613479 1221 ntBASIC14.94□□□□□ -0.02
RAE1P78406 AL138828.2-201ENST00000615812 383 ntBASIC14.94□□□□□ -0.02
RAE1P78406 TEX28P2-201ENST00000617764 1221 ntBASIC14.94□□□□□ -0.02
RAE1P78406 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.94□□□□□ -0.02
RAE1P78406 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RAE1P78406 FO538757.1-201ENST00000623083 1397 ntBASIC14.94□□□□□ -0.02
RAE1P78406 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
RAE1P78406 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RAE1P78406 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.94□□□□□ -0.02
RAE1P78406 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAE1P78406 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.93□□□□□ -0.02
RAE1P78406 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 TSPY26P-202ENST00000565928 3884 ntBASIC14.93□□□□□ -0.02
RAE1P78406 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 AGAP7P-201ENST00000582299 2062 ntBASIC14.93□□□□□ -0.02
RAE1P78406 AGAP14-201ENST00000624701 2060 ntBASIC14.93□□□□□ -0.02
RAE1P78406 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RAE1P78406 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.93□□□□□ -0.02
RAE1P78406 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.93□□□□□ -0.02
RAE1P78406 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.93□□□□□ -0.02
RAE1P78406 HLA-V-204ENST00000476601 1289 ntBASIC14.93□□□□□ -0.02
RAE1P78406 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.93□□□□□ -0.02
RAE1P78406 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.93□□□□□ -0.02
RAE1P78406 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.93□□□□□ -0.02
RAE1P78406 AL691403.2-201ENST00000618460 490 ntBASIC14.93□□□□□ -0.02
RAE1P78406 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
RAE1P78406 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.93□□□□□ -0.02
RAE1P78406 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAE1P78406 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RAE1P78406 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms