Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN2P57739 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN2P57739 SOCS2P1-201ENST00000417727 557 ntBASIC15.54■□□□□ 0.08
CLDN2P57739 ACTG1P3-201ENST00000431775 1114 ntBASIC15.54■□□□□ 0.08
CLDN2P57739 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN2P57739 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN2P57739 AC120045.2-201ENST00000567334 178 ntBASIC15.54■□□□□ 0.08
CLDN2P57739 MIR4313-201ENST00000580760 101 ntBASIC15.54■□□□□ 0.08
CLDN2P57739 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN2P57739 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.54■□□□□ 0.08
CLDN2P57739 AC233724.13-201ENST00000598383 410 ntBASIC15.54■□□□□ 0.08
CLDN2P57739 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN2P57739 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.54■□□□□ 0.08
CLDN2P57739 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN2P57739 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN2P57739 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN2P57739 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN2P57739 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN2P57739 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLDN2P57739 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN2P57739 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN2P57739 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN2P57739 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN2P57739 MTHFR-217ENST00000641820 1569 ntBASIC15.53■□□□□ 0.08
CLDN2P57739 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN2P57739 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLDN2P57739 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN2P57739 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN2P57739 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CLDN2P57739 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN2P57739 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN2P57739 BCRP2-202ENST00000447763 634 ntBASIC15.53■□□□□ 0.08
CLDN2P57739 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN2P57739 KRT18P43-201ENST00000469825 1281 ntBASIC15.53■□□□□ 0.08
CLDN2P57739 RPL13AP25-201ENST00000484130 612 ntBASIC15.53■□□□□ 0.08
CLDN2P57739 BCRP6-201ENST00000510112 632 ntBASIC15.53■□□□□ 0.08
CLDN2P57739 BCRP7-201ENST00000511549 544 ntBASIC15.53■□□□□ 0.08
CLDN2P57739 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN2P57739 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN2P57739 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN2P57739 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN2P57739 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN2P57739 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN2P57739 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN2P57739 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN2P57739 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN2P57739 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLDN2P57739 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLDN2P57739 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN2P57739 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CLDN2P57739 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 AC006449.5-201ENST00000610658 2098 ntBASIC15.52■□□□□ 0.08
CLDN2P57739 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLDN2P57739 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN2P57739 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN2P57739 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN2P57739 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN2P57739 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN2P57739 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN2P57739 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN2P57739 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLDN2P57739 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN2P57739 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.52■□□□□ 0.07
CLDN2P57739 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CLDN2P57739 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CLDN2P57739 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CLDN2P57739 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.52■□□□□ 0.07
CLDN2P57739 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.52■□□□□ 0.07
CLDN2P57739 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms