Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
EPHA4P54764 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
EPHA4P54764 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.17■□□□□ 0.02
EPHA4P54764 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
EPHA4P54764 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
EPHA4P54764 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
EPHA4P54764 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 AC079776.1-201ENST00000401540 1152 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.17■□□□□ 0.02
EPHA4P54764 ACA64.2-201ENST00000459014 129 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.17■□□□□ 0.02
EPHA4P54764 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 RAB43P1-201ENST00000561790 589 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 AL049840.4-201ENST00000602422 811 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 AC017083.2-201ENST00000608069 979 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 AL008721.1-201ENST00000609964 604 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.17■□□□□ 0.02
EPHA4P54764 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
EPHA4P54764 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 AC069224.1-201ENST00000566372 1715 ntBASIC15.17■□□□□ 0.02
EPHA4P54764 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
EPHA4P54764 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.17■□□□□ 0.02
EPHA4P54764 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
EPHA4P54764 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.16■□□□□ 0.02
EPHA4P54764 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA4P54764 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.16■□□□□ 0.02
EPHA4P54764 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA4P54764 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.16■□□□□ 0.02
EPHA4P54764 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA4P54764 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA4P54764 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.16■□□□□ 0.02
EPHA4P54764 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.16■□□□□ 0.02
EPHA4P54764 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.16■□□□□ 0.02
EPHA4P54764 HILS1-202ENST00000545329 423 ntBASIC15.16■□□□□ 0.02
EPHA4P54764 AL359711.2-201ENST00000563105 872 ntBASIC15.16■□□□□ 0.02
EPHA4P54764 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 AC124283.3-201ENST00000570869 594 ntBASIC15.16■□□□□ 0.02
EPHA4P54764 AC008735.3-201ENST00000596646 500 ntBASIC15.16■□□□□ 0.02
EPHA4P54764 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
EPHA4P54764 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA4P54764 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms