Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC25A1P53007 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SLC25A1P53007 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLC25A1P53007 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SLC25A1P53007 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC25A1P53007 FO393414.2-201ENST00000405153 598 ntBASIC14.03□□□□□ -0.16
SLC25A1P53007 HTR5BP-201ENST00000430851 1154 ntBASIC14.03□□□□□ -0.16
SLC25A1P53007 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.03□□□□□ -0.16
SLC25A1P53007 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC25A1P53007 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC25A1P53007 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 AC013726.1-201ENST00000563747 2285 ntBASIC14.03□□□□□ -0.16
SLC25A1P53007 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC25A1P53007 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 CICP24-201ENST00000605464 2705 ntBASIC14.03□□□□□ -0.16
SLC25A1P53007 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC25A1P53007 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC25A1P53007 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC25A1P53007 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
SLC25A1P53007 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SLC25A1P53007 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 AL136379.1-201ENST00000623471 2642 ntBASIC14.02□□□□□ -0.16
SLC25A1P53007 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SLC25A1P53007 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC25A1P53007 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC25A1P53007 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC25A1P53007 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC25A1P53007 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SLC25A1P53007 SPDYE17-201ENST00000412399 783 ntBASIC14.02□□□□□ -0.17
SLC25A1P53007 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC25A1P53007 PGAM5P1-201ENST00000518923 814 ntBASIC14.02□□□□□ -0.17
SLC25A1P53007 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC25A1P53007 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC25A1P53007 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC25A1P53007 MTDHP5-201ENST00000598980 586 ntBASIC14.02□□□□□ -0.17
SLC25A1P53007 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC25A1P53007 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC25A1P53007 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
SLC25A1P53007 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC25A1P53007 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC25A1P53007 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC25A1P53007 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms