Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HMGA2P52926 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 ACE3P-201ENST00000423435 1973 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HMGA2P52926 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 CICP14-201ENST00000629111 2732 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 AC084364.1-201ENST00000551967 1556 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 AL359258.3-201ENST00000622910 2331 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 AC140479.7-201ENST00000636301 2332 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HMGA2P52926 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 AL355306.1-201ENST00000415580 579 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.4□□□□□ -0.1
HMGA2P52926 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.4□□□□□ -0.1
HMGA2P52926 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.4□□□□□ -0.1
HMGA2P52926 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 AP000842.3-202ENST00000569238 1080 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HMGA2P52926 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGA2P52926 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HMGA2P52926 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGA2P52926 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 REXO1L2P-201ENST00000425429 2069 ntBASIC14.4□□□□□ -0.1
HMGA2P52926 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGA2P52926 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMGA2P52926 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HMGA2P52926 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGA2P52926 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGA2P52926 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGA2P52926 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
HMGA2P52926 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGA2P52926 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGA2P52926 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGA2P52926 AC243562.1-201ENST00000560672 389 ntBASIC14.39□□□□□ -0.11
HMGA2P52926 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGA2P52926 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGA2P52926 AC084121.4-201ENST00000641598 221 ntBASIC14.39□□□□□ -0.11
HMGA2P52926 AF228730.8-201ENST00000642140 221 ntBASIC14.39□□□□□ -0.11
HMGA2P52926 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGA2P52926 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGA2P52926 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGA2P52926 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGA2P52926 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGA2P52926 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGA2P52926 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGA2P52926 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGA2P52926 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGA2P52926 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGA2P52926 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGA2P52926 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMGA2P52926 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGA2P52926 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms