Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC084364.1-201ENST00000551967 1556 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 AL109954.1-202ENST00000564051 2148 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF140P52738 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ZNF140P52738 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 MRPS18AP1-201ENST00000414458 589 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 BASP1P1-201ENST00000430708 665 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF140P52738 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF140P52738 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 SPDYE18-201ENST00000510091 1050 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 AC093214.1-201ENST00000511688 1107 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ZNF140P52738 AC015910.1-201ENST00000579400 975 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 AC004840.1-201ENST00000636359 365 ntBASIC15.67■□□□□ 0.1
ZNF140P52738 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZNF140P52738 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ZNF140P52738 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
ZNF140P52738 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF140P52738 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF140P52738 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF140P52738 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF140P52738 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF140P52738 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF140P52738 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF140P52738 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF140P52738 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF140P52738 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF140P52738 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF140P52738 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF140P52738 AC027796.2-201ENST00000575326 344 ntBASIC15.66■□□□□ 0.1
ZNF140P52738 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF140P52738 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF140P52738 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF140P52738 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF140P52738 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF140P52738 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF140P52738 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF140P52738 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF140P52738 AC138035.3-201ENST00000622706 2791 ntBASIC15.65■□□□□ 0.1
ZNF140P52738 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF140P52738 KRT8P44-201ENST00000441609 1350 ntBASIC15.65■□□□□ 0.1
ZNF140P52738 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF140P52738 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF140P52738 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
ZNF140P52738 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF140P52738 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.65■□□□□ 0.1
ZNF140P52738 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF140P52738 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF140P52738 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF140P52738 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF140P52738 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF140P52738 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF140P52738 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
ZNF140P52738 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF140P52738 AL133267.1-201ENST00000398220 340 ntBASIC15.65■□□□□ 0.1
ZNF140P52738 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF140P52738 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.65■□□□□ 0.1
ZNF140P52738 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF140P52738 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF140P52738 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
ZNF140P52738 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms