Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRCA2P51587 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.26■□□□□ 0.35
BRCA2P51587 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.26■□□□□ 0.35
BRCA2P51587 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRCA2P51587 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.26■□□□□ 0.35
BRCA2P51587 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
BRCA2P51587 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCA2P51587 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCA2P51587 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.26■□□□□ 0.35
BRCA2P51587 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCA2P51587 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCA2P51587 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCA2P51587 AL118516.1-201ENST00000564152 670 ntBASIC17.26■□□□□ 0.35
BRCA2P51587 AC027139.1-201ENST00000565286 951 ntBASIC17.26■□□□□ 0.35
BRCA2P51587 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCA2P51587 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BRCA2P51587 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCA2P51587 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.26■□□□□ 0.35
BRCA2P51587 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCA2P51587 AC007787.1-201ENST00000588095 1583 ntBASIC17.26■□□□□ 0.35
BRCA2P51587 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BRCA2P51587 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 POU5F1P6-201ENST00000466990 990 ntBASIC17.25■□□□□ 0.35
BRCA2P51587 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCA2P51587 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
BRCA2P51587 AC097359.3-201ENST00000603982 1210 ntBASIC17.25■□□□□ 0.35
BRCA2P51587 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.25■□□□□ 0.35
BRCA2P51587 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
BRCA2P51587 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCA2P51587 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.25■□□□□ 0.35
BRCA2P51587 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
BRCA2P51587 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.25■□□□□ 0.35
BRCA2P51587 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
BRCA2P51587 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCA2P51587 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BRCA2P51587 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
BRCA2P51587 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCA2P51587 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.25■□□□□ 0.35
BRCA2P51587 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.25■□□□□ 0.35
BRCA2P51587 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCA2P51587 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 AC025271.4-201ENST00000621477 1726 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCA2P51587 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.24■□□□□ 0.35
BRCA2P51587 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCA2P51587 AL157792.1-201ENST00000488281 530 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
BRCA2P51587 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 AC103691.2-201ENST00000618824 433 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
BRCA2P51587 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCA2P51587 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 ACTBP8-201ENST00000403258 1108 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.24■□□□□ 0.35
BRCA2P51587 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.24■□□□□ 0.35
BRCA2P51587 NDUFS6P1-201ENST00000485187 316 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.24■□□□□ 0.35
BRCA2P51587 RTN3P1-201ENST00000536295 711 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 AC012044.1-201ENST00000603431 297 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.24■□□□□ 0.35
BRCA2P51587 AL391280.1-201ENST00000506969 1062 ntBASIC17.24■□□□□ 0.35
BRCA2P51587 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.24■□□□□ 0.35
BRCA2P51587 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.24■□□□□ 0.35
BRCA2P51587 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCA2P51587 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCA2P51587 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 AL008707.1-201ENST00000422498 534 ntBASIC17.23■□□□□ 0.35
BRCA2P51587 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.23■□□□□ 0.35
BRCA2P51587 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.23■□□□□ 0.35
BRCA2P51587 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms