Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
SLC6A12P48065 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A12P48065 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A12P48065 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A12P48065 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 AC100757.3-201ENST00000622361 1406 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 RPL5P21-201ENST00000404620 815 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC6A12P48065 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SLC6A12P48065 TSSK5P-201ENST00000423978 907 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC6A12P48065 SDHAP3-202ENST00000515467 728 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC6A12P48065 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC6A12P48065 AC015910.1-201ENST00000579400 975 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 AL590560.3-201ENST00000623350 461 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 AF228730.6-201ENST00000641497 218 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 AC084121.3-201ENST00000641716 218 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 AL109936.8-201ENST00000641772 604 ntBASIC15.19■□□□□ 0.02
SLC6A12P48065 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SLC6A12P48065 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC6A12P48065 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A12P48065 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A12P48065 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC6A12P48065 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC6A12P48065 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC6A12P48065 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC6A12P48065 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC6A12P48065 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SLC6A12P48065 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC6A12P48065 MIR943-201ENST00000401286 94 ntBASIC15.18■□□□□ 0.02
SLC6A12P48065 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC6A12P48065 TOMM22P5-201ENST00000416399 439 ntBASIC15.18■□□□□ 0.02
SLC6A12P48065 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC6A12P48065 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SLC6A12P48065 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC6A12P48065 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC6A12P48065 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC6A12P48065 DUX4L27-201ENST00000554796 1261 ntBASIC15.18■□□□□ 0.02
SLC6A12P48065 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
SLC6A12P48065 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms