Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HMGCLP35914 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.68■□□□□ 0.1
HMGCLP35914 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCLP35914 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
HMGCLP35914 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.68■□□□□ 0.1
HMGCLP35914 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCLP35914 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCLP35914 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCLP35914 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 TMBIM7P-203ENST00000641617 1718 ntBASIC15.68■□□□□ 0.1
HMGCLP35914 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HMGCLP35914 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HMGCLP35914 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HMGCLP35914 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 FAM207CP-201ENST00000443486 507 ntBASIC15.67■□□□□ 0.1
HMGCLP35914 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCLP35914 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCLP35914 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 AC104794.3-201ENST00000566840 1248 ntBASIC15.67■□□□□ 0.1
HMGCLP35914 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.67■□□□□ 0.1
HMGCLP35914 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.67■□□□□ 0.1
HMGCLP35914 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCLP35914 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 AC136621.1-201ENST00000624017 2304 ntBASIC15.67■□□□□ 0.1
HMGCLP35914 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCLP35914 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCLP35914 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCLP35914 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCLP35914 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.66■□□□□ 0.1
HMGCLP35914 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGCLP35914 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HMGCLP35914 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGCLP35914 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HMGCLP35914 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms